rs76510925 chr7:135170973 G>C
- Sequence
gaggagggtgaaagttcaattctt[G/C]gcccctgaagttagcggaagggaa
- ASB in cell types
- K562 (myelogenous leukemia) CD14+ monocytes HepG2 (hepatoblastoma) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- STAT1_HUMAN RAD21_HUMAN GABPA_HUMAN ERF_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.24 | 0.04 | 1.75 | n/a | No Hit | |||
| RAD21_HUMAN | 1.15 | 0.43 | 1.26 | n/a | n/a | |||
| GABPA_HUMAN | 2.00 | -0.04 | 1.50 | n/a | No Hit | |||
| ERF_HUMAN | -1.16 | 1.98 | 1.00 | n/a | No Hit | |||
| ZBT11_HUMAN | 1.98 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Kidney_Cortex, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Testis, Thyroid, Vagina, Whole_Blood