rs76568792 chr19:39767310 T>C
- Sequence
gtgtgttggtgtgcacctgtaatc[T/C]cagctattcaggaggctgaggtag
- ASB in cell types
- epithelial cell of prostate GM23338 KMS-11 (Plasma cell myeloma) GM18951 (B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.13 | 3.22 | 1.88 | n/a | No Hit | |||
| STAG1_HUMAN | n/a | 2.40 | 1.00 | n/a | n/a |
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