rs76660901 chr1:202160710 C>T
- Sequence
attctgccctcctgtgcctgctgc[C/T]gctgccaccaggggtcggctgcct
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) primary B-CLL cells
- ASB for transcription factors
- CTCF_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.07 | 1.27 | 1.58 | 0.05 | Weak Concordant | |||
| BRD4_HUMAN | 2.41 | 0.18 | 2.50 | n/a | n/a |
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Motif analysis
