rs76674534 chr15:50908961 A>G
- Sequence
ccgccggcccgggagctcagggac[A/G]tcggagtgaggcccccgcgccagg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) primary B-CLL cells breast tumor 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ESR1_HUMAN BRD4_HUMAN ANDR_HUMAN IKZF2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.54 | -0.35 | 2.88 | n/a | No Hit | |||
| BRD4_HUMAN | 2.35 | 0.44 | 2.80 | n/a | n/a | |||
| ANDR_HUMAN | 2.34 | -1.15 | 2.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.85 | -0.74 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Testis, Whole_Blood