rs76678756 chr5:1209070 C>G
- Sequence
gcctttggaaactccaggccactc[C/G]tgttcaccaggaaccagacaggcc
- ASB in cell types
- HepG2 (hepatoblastoma) K562 (myelogenous leukemia) right lobe of liver TTC-1240 (Rhabdoid tumor of the kidney)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.67 | 0.30 | 2.08 | n/a | No Hit | |||
| RAD21_HUMAN | 2.17 | -0.33 | 1.88 | n/a | n/a | |||
| STAG1_HUMAN | 1.44 | -0.39 | 1.00 | n/a | n/a |
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