rs766890 chr1:235972381 T>C

Sequence
tttccctgttaaatcaagtttagc[T/C]taaagctactcacatattttaagt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN MEF2B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -2.33 2.40 1.005.3·10-4 1.00 n/a n/a
MEF2B_HUMAN -1.66 2.18 1.000.05 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol waist hip ratio
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Tibial Colon_Sigmoid Nerve_Tibial Skin_Sun_Exposed_Lower_leg

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