rs768342 chr3:108296400 G>T

Sequence
atcttctaattcctggacttttca[G/T]atctgtactgactcagatctgggt
ASB for transcription factors
IKZF2_HUMAN
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View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.08 -1.26 4.3·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP diabetic retinopathy in type 2 diabetes mellitus,  waist hip ratio in controls
GTEx eQTL Colon_Transverse,  Kidney_Cortex,  Lung,  Nerve_Tibial,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Whole_Blood

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