rs768543 chr6:14792245 A>C
- Sequence
catatgacaataaatcattttggg[A/C]acttcctgaatctctgccaagttg
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.21 | n/a | 2.00 | n/a | No Hit | |||
| SPI1_HUMAN | -3.38 | 3.23 | 1.00 | 3.87 | Concordant |
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Motif analysis
Genetic associations
GRASP eye color, fasting insulin, hdl cholesterol, premature ovarian failure, schizophrenia, triglycerides change with statins