ADASTRA v6.1.0
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rs7688
chr12:49763288
T
>
C
Sequence
gccacccggcccttccttcctcat[T/C]gttgtttggtatgcgcacagttcc
ASB in cell types
GM19240 (B cells Lymphoblastoid Cell Lines)
dermal fibroblasts
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM19240 (B cells Lymphoblastoid Cell Lines)
1.14
-1.34
4.1·10
-3
1.00
1.11
dermal fibroblasts
2.36
-2.38
7.0·10
-3
1.00
1.00
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adrenal_Gland
,
Artery_Aorta
,
Artery_Tibial
,
Brain_Cerebellar_Hemisphere
,
Brain_Hippocampus
,
Cells_Cultured_fibroblasts
,
Heart_Left_Ventricle
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pituitary
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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