rs7688 chr12:49763288 T>C

Sequence
gccacccggcccttccttcctcat[T/C]gttgtttggtatgcgcacagttcc
ASB in cell types
GM19240 (B cells Lymphoblastoid Cell Lines) dermal fibroblasts

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM19240 (B cells Lymphoblastoid Cell Lines) 1.14 -1.34 4.1·10-31.00 1.11
dermal fibroblasts 2.36 -2.38 7.0·10-31.00 1.00
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adrenal_Gland Artery_Aorta Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Hippocampus Cells_Cultured_fibroblasts Heart_Left_Ventricle Muscle_Skeletal Nerve_Tibial Pituitary Skin_Sun_Exposed_Lower_leg Testis Thyroid Whole_Blood

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