rs76882807 chr17:55762205 G>A
- Sequence
gtatgctggctcaggtttaggatg[G/A]gccaaagttcaggggcctggagga
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- PPARG_HUMAN ZN614_HUMAN SOX13_HUMAN KDM6A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PPARG_HUMAN | 2.79 | n/a | 2.00 | -2.80 | Concordant | |||
| ZN614_HUMAN | 3.24 | n/a | 2.00 | n/a | No Hit | |||
| SOX13_HUMAN | 2.67 | -4.89 | 2.00 | n/a | No Hit | |||
| KDM6A_HUMAN | 2.35 | -1.58 | 2.00 | n/a | n/a |
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Motif analysis
