rs7710 chr19:10115580 A>G

Sequence
gcggcggtggaagctgatgaaggc[A/G]aagccctgtggaggggcgggatgg
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
SFPQ_HUMAN AGO2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SFPQ_HUMAN n/a 3.62 1.004.5·10-3 3.00 n/a n/a
AGO2_HUMAN 0.36 1.51 0.980.04 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP refractive error
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Muscularis,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Whole_Blood

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