rs773904 chr19:16889320 G>A
- Sequence
atggtgagtggtcctggctttggg[G/A]tgcagagatggggttacatcagag
- ASB in cell types
- K562 (myelogenous leukemia) SEM (childhood B acute lymphoblastic leukemia)
- ASB for transcription factors
- RFOX2_HUMAN ENL_HUMAN GMEB1_HUMAN ERG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFOX2_HUMAN | 1.68 | -4.24 | 2.00 | n/a | n/a | |||
| ENL_HUMAN | 2.19 | -1.01 | 2.00 | n/a | n/a | |||
| GMEB1_HUMAN | 2.69 | -4.93 | 2.00 | n/a | No Hit | |||
| ERG_HUMAN | 0.37 | 1.72 | 1.17 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Colon_Transverse, Skin_Sun_Exposed_Lower_leg