rs7756525 chr6:41708002 T>C

Sequence
agacggctctaggctctgtggcgc[T/C]cagcacgtctgtacctccctctag
ASB in cell types
MDM(monocyte derived macrophages) macrophages form periferal blood naive IgD+ B cells
ASB for transcription factors
FOXP1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXP1_HUMAN -0.21 3.10 0.803.3·10-3 2.00 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP bipolar disorder,  cystatin c in serum,  ldl cholesterol,  major depressive disorder (narrow definition),  major depressive disorder (narrow definition) (females),  primary rhegmatogenous retinal detachment,  serum creatinine
GTEx eQTL Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Muscle_Skeletal

Download