rs7756733 chr6:130076868 T>A
- Sequence
ttttatcttctctattgaggcagc[T/A]tctttgttttaagtggcgactttg
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) GM12891 (male B- cells lymphoblastoid cell line) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.03 | 1.00 | 1.23 | n/a | No Hit | |||
| STAG1_HUMAN | 1.55 | -1.01 | 1.25 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, hdl cholesterol, height, infant head circumference, ldl cholesterol, total cholesterol, triglycerides, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Breast_Mammary_Tissue, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Thyroid, Whole_Blood