rs7759742 chr6:32413959 T>A
- Sequence
atataatcatgatacaaaatccct[T/A]tatagctattaggtgtcattactg
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.09 | 0.34 | 1.21 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
EMBL-EBI waist-to-hip ratio adjusted for bmi (adjusted for smoking behaviour), waist-to-hip ratio adjusted for bmi (joint analysis main effects and smoking interaction), waist-to-hip ratio adjusted for bmi in non-smokers, waist-to-hip ratio adjusted for bmi x sex x age interaction (4df test), waist-to-hip ratio adjusted for body mass index
GRASP coronary artery disease (cad), cystatin c in serum, diabetic retinopathy in type 2 diabetes mellitus, diastolic blood pressure (dbp), hdl cholesterol, height, infant head circumference, ldl cholesterol, mitral annular calcium, parkinsons disease, rheumatoid arthritis, sarcoidosis, serum creatinine, systolic blood pressure (sbp), total cholesterol, total cholesterol change with statins, triglycerides, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Amygdala, Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Testis, Thyroid, Uterus, Vagina, Whole_Blood