rs7763318 chr6:132919644 A>C
- Sequence
ctctctctctctcttcctgtgtcc[A/C]actcctccagcaaaggaccatgga
- ASB in cell types
- breast tumor hMADS-3 (adipose-derived stem cells) upper lobe of left lung
- ASB for transcription factors
- ESR1_HUMAN PPARG_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 3.12 | -5.64 | 2.00 | n/a | No Hit | |||
| PPARG_HUMAN | 1.86 | -1.38 | 1.00 | 3.27 | Discordant | |||
| EP300_HUMAN | 2.42 | 0.11 | 1.50 | n/a | n/a |
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Motif analysis
