rs7769922 chr6:2971659 A>G
- Sequence
ctaccgtcgcccgtccggagcgcg[A/G]agggagaggcggggcgggacgtgc
- ASB in cell types
- K562 (myelogenous leukemia) 22RV1 (prostate carcinoma) HepG2 (hepatoblastoma) breast tumor
- ASB for transcription factors
- ANDR_HUMAN TYY1_HUMAN RFOX2_HUMAN ARI1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.99 | 2.77 | 2.00 | n/a | No Hit | |||
| TYY1_HUMAN | 2.56 | -5.44 | 2.00 | n/a | No Hit | |||
| RFOX2_HUMAN | n/a | 2.21 | 3.00 | n/a | n/a | |||
| ARI1B_HUMAN | n/a | 2.63 | 3.00 | n/a | n/a | |||
| ESR1_HUMAN | 0.27 | 2.71 | 1.67 | n/a | No Hit |
Items per page:
1 – 5 of 5
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Whole_Blood