rs7770346 chr6:43977951 A>G
- Sequence
gacatctggttagaaggtgtgaga[A/G]ggtggaaggggctaagagggtggc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- BMI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BMI1_HUMAN | -2.17 | 2.60 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP college completion, hypertension (early onset hypertension), microalbuminuria, sporadic creutzfeldt-jakob disease