rs7770788 chr6:162250358 C>T

Sequence
tacatttttgtttggtaaagattt[C/T]catccagtgtaacagataacccca
ASB in cell types
22RV1 (prostate carcinoma) LNCaP (prostate carcinoma) LNCaP95
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) 3.27 -3.22 1.9·10-41.00 2.00
LNCaP (prostate carcinoma) -0.60 1.13 1.008.0·10-4 1.53
LNCaP95 0.48 1.71 1.001.2·10-3 2.00
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Motif analysis

No data available

Genetic associations

GRASP diabetic retinopathy in type 2 diabetes mellitus,  height,  infant head circumference,  parkinsons disease,  years of education

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