rs7772036 chr6:111739596 G>A
- Sequence
gtgatttttcttataatggtttca[G/A]ttccactccatcagttttgaggca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) monocyte-derived dendritic cells THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- SPI1_HUMAN IKZF1_HUMAN REQU_HUMAN MTA2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.24 | -0.16 | 1.50 | -2.31 | Concordant | |||
| IKZF1_HUMAN | 2.74 | -2.94 | 1.25 | n/a | n/a | |||
| REQU_HUMAN | 3.07 | -2.94 | 1.00 | n/a | n/a | |||
| MTA2_HUMAN | 2.56 | -4.43 | 1.50 | n/a | n/a |
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Motif analysis
