rs7776236 chr6:113434010 C>T

Sequence
gtaaacagataaaatgcaacaaga[C/T]tgataaaagtttggtgaagcagta
ASB in cell types
MCF7 WS8 cells MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
FOXA1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.21 -0.04 2.5·10-71.00 1.49 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol change with statins,  irritible bowel syndrome
GTEx eQTL Cells_Cultured_fibroblasts,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis

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