rs7776539 chr7:3290148 G>T
- Sequence
gtggggaagcccaagccacaagaa[G/T]ccacaaaaatgcactctggctcat
- ASB in cell types
- RH4 (alveolar rhabdomyosarcoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.40 | 0.30 | 1.00 | n/a | No Hit | |||
| CTCF_HUMAN | -1.38 | 1.75 | 1.50 | -3.73 | Discordant |
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Motif analysis
