rs7777809 chr7:16098296 G>C

Sequence
agaacacaatgtactctgctaaaa[G/C]gaaaactataaagttaaaatgtat
ASB in cell types
T47D (invasive ductal carcinoma) HUVEC-C (HUVEC, umbilical vein endothelial cells) breast tumor xenograft
ASB for transcription factors
PRGR_HUMAN TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRGR_HUMAN 1.75 0.53 1.2·10-51.00 1.25 n/a No Hit
TF65_HUMAN 1.53 n/a 0.011.00 2.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Brain_Cerebellar_Hemisphere

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