rs7778320 chr7:27614294 T>G

Sequence
cacctaatattacaatacaacatt[T/G]taaacatagtatatgcctgctacc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ARI1B_HUMAN ZEB2_HUMAN MTG16_HUMAN RING2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ARI1B_HUMAN n/a 2.25 1.004.6·10-5 2.00 n/a n/a
ZEB2_HUMAN -1.98 2.83 1.007.4·10-4 2.00 n/a No Hit
MTG16_HUMAN -1.72 2.77 1.008.9·10-3 2.00 n/a n/a
RING2_HUMAN n/a 3.00 1.000.01 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP parkinsons disease,  rheumatoid arthritis
GTEx eQTL Adipose_Subcutaneous,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Muscle_Skeletal,  Nerve_Tibial,  Ovary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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