rs7779566 chr7:37726086 A>C
- Sequence
atttccctcactgccaccatgtgg[A/C]aaccaatgggtgttttaatttggt
- ASB in cell types
- MS-1 (Small cell lung carcinoma) GM02610 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.89 | 2.32 | 1.28 | 1.41 | Weak Concordant |
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Motif analysis
