rs7784965 chr7:54784112 G>C

Sequence
gcccagctggttttaacacctgtt[G/C]atgacttttgcctgcaacagctgc
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
SCRT2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SCRT2_HUMAN 2.71 -2.78 0.011.00 1.00 -3.60 Concordant
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Motif analysis

SCRT2_HUMAN Concordant
SCRT2_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (choroidal neovascularization) vs. no amd hdl cholesterol change with statins
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia Testis Thyroid

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