rs7785833 chr7:156988711 G>A
- Sequence
gctgcactgatgaagccgatgggg[G/A]gtgtggctgcacaggggccgagtt
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- NFIL3_HUMAN SKI_HUMAN TBX3_HUMAN CEBPA_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIL3_HUMAN | 3.23 | n/a | 1.50 | n/a | No Hit | |||
| SKI_HUMAN | 2.82 | n/a | 1.00 | n/a | n/a | |||
| TBX3_HUMAN | 3.02 | -2.85 | 1.00 | -3.71 | Concordant | |||
| CEBPA_HUMAN | 1.98 | -0.30 | 1.25 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Heart_Left_Ventricle, Muscle_Skeletal, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Spleen