rs7786623 chr7:26329056 T>C
- Sequence
tgcttctgctttggccccctacag[T/C]ctgttccacacccagcagccagag
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) GM02630 (Fanconi anemi) GM19240 (B cells Lymphoblastoid Cell Lines) GM18526 (B – cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.84 | 0.08 | 1.48 | -0.57 | Weak Concordant |
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Motif analysis
