rs778813 chr19:5822419 G>A
- Sequence
cacgccgccccacactaggcagcc[G/A]ggagggggaatgtaaactcgggct
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- GLIS1_HUMAN ZIC2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GLIS1_HUMAN | 1.71 | -1.10 | 2.00 | -1.43 | Weak Concordant | |||
| ZIC2_HUMAN | 2.12 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
