rs7792350 chr7:33195513 G>A

Sequence
atttctcaatatgctggtgatgca[G/A]catattgtatgtaagttatctagt
ASB in cell types
K562 (myelogenous leukemia) HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
JUN_HUMAN CEBPB_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUN_HUMAN -2.95 2.02 1.003.5·10-3 1.33 n/a No Hit
CEBPB_HUMAN -0.63 1.89 1.000.02 1.70 3.93 Concordant
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Motif analysis

CEBPB_HUMAN Concordant
CEBPB_HUMAN pic

Genetic associations

GTEx eQTL Brain_Putamen_basal_ganglia Cells_Cultured_fibroblasts Testis Thyroid

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