rs7796547 chr7:2080022 T>C

Sequence
gaccatccgtgcgtccgtcaaccc[T/C]gtcagcgctggctgcctgctcgcc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
LMBL2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
LMBL2_HUMAN 2.08 n/a 0.041.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol,  obesity with early age of onset (age >2),  total cholesterol
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Tibial,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Nerve_Tibial

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