rs7796617 chr7:19587567 G>A
- Sequence
caagaagaagggaacctcagtcct[G/A]caactgcagaaaacttcttccaac
- ASB in cell types
- MS-1 (Small cell lung carcinoma) GM12892 (female B-cells lymphoblastoid cell line) GM23338 GSC23 (Glioblastoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.39 | 2.42 | 1.95 | n/a | No Hit |
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