rs7802386 chr7:89123968 A>C
- Sequence
agcatgggaagtctgaaacacaac[A/C]aagtgcaaactcctcccaggttct
- ASB in cell types
- SNU-16 (Gastric adenocarcinoma)
- ASB for transcription factors
- HNF4A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | 2.95 | n/a | 2.00 | -3.67 | Concordant |
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Motif analysis
Genetic associations
GRASP diabetic retinopathy in type 2 diabetes mellitus, refractive error, schizophrenia, urinary albumin-to-creatinine ratio