rs7803490 chr7:139045615 T>C

Sequence
cttgagccaatgggtagatggtga[T/C]gcttttcacttacatacagatcct
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
SMCA4_HUMAN SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN -0.40 2.12 1.002.1·10-3 1.00 n/a n/a
SPI1_HUMAN 0.10 1.21 1.002.8·10-3 1.38 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence,  parkinsons disease
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Cells_Cultured_fibroblasts,  Lung,  Nerve_Tibial

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