rs7803808 chr7:154837838 A>G
- Sequence
gctcatttctttcctttccccagt[A/G]ttggtgaggttttctagaacaatg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- NFAC3_HUMAN HTF4_HUMAN TBX21_HUMAN MEF2B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFAC3_HUMAN | -2.56 | 2.90 | 1.00 | n/a | No Hit | |||
| HTF4_HUMAN | -1.88 | 1.88 | 1.00 | n/a | No Hit | |||
| TBX21_HUMAN | -3.69 | 2.41 | 1.33 | n/a | No Hit | |||
| MEF2B_HUMAN | -2.06 | 2.44 | 1.00 | -2.80 | Discordant | |||
| TRI22_HUMAN | -2.33 | 2.67 | 1.00 | n/a | n/a |
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Motif analysis
Genetic associations
GRASP bipolar disorder, fasting blood glucose, hdl cholesterol change with statins, ldl cholesterol, obesity with early age of onset (age >2), total cholesterol