rs7805462 chr7:2309973 G>A
- Sequence
aaggagtcatcgccaggtcaacgc[G/A]gacaaacagcacggagcttccgaa
- ASB in cell types
- A549 (lung carcinoma) HepG2 (hepatoblastoma) SK-BR-3 (breast adenocarcinoma) primary human neonatal keratinocytes
- ASB for transcription factors
- TEAD3_HUMAN ERR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TEAD3_HUMAN | -2.56 | 2.96 | 1.00 | n/a | No Hit | |||
| ERR1_HUMAN | 1.59 | -0.43 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP barnes akathisia rating scale, diastolic blood pressure (dbp), major depressive disorder, systolic blood pressure (sbp)
GTEx eQTL Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid