rs7809679 chr7:1803712 G>A

Sequence
ttgtctgtgggctgacttctttcc[G/A]gctggaggggggttatctcagggc
ASB in cell types
MDA-MB-231ERb(triple negative breast cancer)
ASB for transcription factors
RARA_HUMAN ESR2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RARA_HUMAN -1.96 2.24 1.000.03 1.00 n/a No Hit
ESR2_HUMAN 2.12 -1.50 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia

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