rs7809890 chr7:55366453 C>T
- Sequence
gcagttcggccctcctggccccaa[C/T]gcgcctttgaaatacgcggacagt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) K562 (myelogenous leukemia) primary B-CLL cells HL-60 (acute myeloid leukemia)
- ASB for transcription factors
- FOXK2_HUMAN STAT1_HUMAN TEAD3_HUMAN BRD4_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 4.09 | -0.47 | 1.67 | n/a | No Hit | |||
| STAT1_HUMAN | 1.66 | 0.30 | 1.33 | n/a | No Hit | |||
| TEAD3_HUMAN | 2.14 | -1.81 | 1.00 | n/a | No Hit | |||
| BRD4_HUMAN | 1.82 | 0.50 | 1.33 | n/a | n/a |
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