rs7812866 chr8:37892771 A>C

Sequence
tttaattttaacactcagtggctt[A/C]ccattcctcctaagtaaagcctcg
ASB in cell types
K562 (myelogenous leukemia) CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
SPI1_HUMAN ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN -0.53 1.79 1.008.7·10-3 1.25 3.77 Concordant
ESR1_HUMAN -0.01 1.67 1.000.02 1.33 n/a No Hit
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Motif analysis

SPI1_HUMAN Concordant
SPI1_HUMAN pic

Genetic associations

GRASP aortic valve calcium arthritis including non-rheumatoid college completion comorbid depressive syndrome and alcohol dependence height obesity with early age of onset (age >2) waist hip ratio
GTEx eQTL Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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