rs7814465 chr8:23219650 C>G

Sequence
cccacagacaagccaggtgagagg[C/G]gcagcctaagccctgaaaaaccac
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN RELB_HUMAN HTF4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.01 -1.36 8.5·10-51.00 1.00 n/a n/a
RELB_HUMAN 2.81 -2.61 3.5·10-31.00 1.00 n/a No Hit
HTF4_HUMAN 2.46 -2.18 0.021.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP exudative age-related macular degeneration
GTEx eQTL Adipose_Subcutaneous Adrenal_Gland Artery_Aorta Artery_Tibial Cells_Cultured_fibroblasts Esophagus_Mucosa Lung Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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