rs7815960 chr8:23084267 G>C

Sequence
cccctgccctgcccatgggtttct[G/C]ggcctcacttggagccctgggctg
ASB in cell types
A549 (lung carcinoma) MM1.S (plasma cell myeloma)
ASB for transcription factors
RAD21_HUMAN CTCF_HUMAN SMC3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 1.49 0.40 5.1·10-40.94 1.96 n/a n/a
CTCF_HUMAN 1.37 0.17 8.4·10-41.00 1.60 n/a No Hit
SMC3_HUMAN 1.12 0.05 0.020.94 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts

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