rs7816081 chr8:100847686 A>C
- Sequence
tggctgcgggcgccacttgaaaca[A/C]gccagtcatgcctctcccaaccct
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) neural cell HEK293T (embryonic kidney) HEK293 (embryonic kidney)
- ASB for transcription factors
- PKNX1_HUMAN RAD21_HUMAN STAG1_HUMAN ZN217_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | -1.24 | 2.48 | 1.50 | 0.46 | Weak Concordant | |||
| RAD21_HUMAN | 0.99 | 0.65 | 1.91 | n/a | n/a | |||
| STAG1_HUMAN | 0.92 | 1.45 | 1.05 | n/a | n/a | |||
| ZN217_HUMAN | 1.66 | -1.21 | 1.00 | n/a | n/a |
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Motif analysis
