rs7816400 chr8:100847603 G>A
- Sequence
cacggcatccactccttacagctg[G/A]gagccagcagaggagctagtgggc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) THP-1 (acute monocytic leukemia) GM12892 (female B-cells lymphoblastoid cell line) WA09 (embryonic stem cells)
- ASB for transcription factors
- STAG1_HUMAN IKZF2_HUMAN HCFC1_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.86 | 1.88 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | 1.84 | -1.02 | 1.00 | n/a | n/a | |||
| HCFC1_HUMAN | 1.97 | -1.63 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 1.09 | -0.06 | 1.50 | n/a | n/a | |||
| SIN3A_HUMAN | 1.43 | -0.99 | 1.50 | n/a | n/a |
Items per page:
1 – 5 of 5