rs7818181 chr8:10839005 G>A
- Sequence
agctgtttctgttctttgctcact[G/A]tacaactcgccaagcaggacccgc
- ASB in cell types
- K562 (myelogenous leukemia) erythroid cells THP-1 (acute monocytic leukemia) foreskin keratinocyte
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.97 | 0.07 | 2.05 | |||
| erythroid cells | n/a | 3.51 | 2.00 | |||
| THP-1 (acute monocytic leukemia) | 1.06 | 0.30 | 2.00 | |||
| foreskin keratinocyte | n/a | 0.87 | 2.50 | |||
| HEK293 (embryonic kidney) | 0.75 | 0.04 | 1.85 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid, Vagina, Whole_Blood