rs7819622 chr8:60910566 G>A

Sequence
gcttccgtctgtccttttggagaa[G/A]actctttccctccccaggacagca
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -1.36 2.34 1.005.1·10-4 1.00 n/a n/a
CTCF_HUMAN -0.18 1.40 1.004.9·10-3 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Colon_Transverse

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