rs781983 chr6:70667674 A>C
- Sequence
accttgggcagaaggcctttttgc[A/C]aaaagactcggcagcccgggcccc
- ASB in cell types
- K562 (myelogenous leukemia) MOLM14 (Adult acute myeloid leukemia) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- CDK8_HUMAN ETS1_HUMAN NRF1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK8_HUMAN | -1.02 | 1.74 | 2.00 | n/a | n/a | |||
| ETS1_HUMAN | -0.53 | 2.11 | 2.50 | n/a | No Hit | |||
| NRF1_HUMAN | 0.71 | 0.36 | 1.83 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid, Whole_Blood