rs7821358 chr8:28203173 A>G
- Sequence
agaaaattgcttctctgatgactc[A/G]cagggaaggagccataaagcactg
- ASB in cell types
- TTC-1240 (Rhabdoid tumor of the kidney) HCASMC (Human coronary artery smooth muscle cells) HEK293T (embryonic kidney) MCF10A (breast epithelial cells)
- ASB for transcription factors
- JUN_HUMAN PRDM9_HUMAN PRD10_HUMAN TEAD4_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 2.01 | n/a | 2.00 | -6.01 | Concordant | |||
| PRDM9_HUMAN | 2.63 | -2.67 | 1.00 | n/a | No Hit | |||
| PRD10_HUMAN | 2.15 | -4.02 | 1.50 | n/a | n/a | |||
| TEAD4_HUMAN | 2.63 | -2.67 | 1.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GRASP acute lung injury following major trauma, body mass index (bmi), fasting blood glucose, hdl cholesterol, obesity with early age of onset (age >2), refractive error