rs7821559 chr8:9555790 A>G
- Sequence
ccccgttcccttggctgttctctg[A/G]gctcccaatacttccctccttctc
- ASB in cell types
- HepG2 (hepatoblastoma) CD14+ monocytes HEK293 (embryonic kidney) HEK293T (embryonic kidney)
- ASB for transcription factors
- STAT1_HUMAN RBM25_HUMAN HCFC1_HUMAN PKNX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.23 | 0.11 | 2.00 | n/a | No Hit | |||
| RBM25_HUMAN | 1.81 | -0.24 | 1.00 | n/a | n/a | |||
| HCFC1_HUMAN | 1.86 | n/a | 2.50 | n/a | n/a | |||
| PKNX1_HUMAN | -2.17 | 2.60 | 1.00 | n/a | No Hit |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellum, Brain_Cortex, Brain_Spinal_cord_cervical_c-1, Cells_Cultured_fibroblasts, Colon_Transverse, Muscle_Skeletal, Nerve_Tibial, Small_Intestine_Terminal_Ileum, Testis, Thyroid