rs7822158 chr8:102794540 C>T
- Sequence
tactgcctgcctcgagccaccctg[C/T]cctggggctccccaccattcctcc
- ASB in cell types
- Ishikawa (endometrial adenocarcinoma) ESO-26 (Gastroesophageal junction adenocarcinoma)
- ASB for transcription factors
- ESR1_HUMAN KLF5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.46 | -0.11 | 1.39 | -0.64 | Weak Concordant | |||
| KLF5_HUMAN | 2.75 | -4.19 | 1.33 | -0.62 | Weak Concordant |
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Motif analysis
