rs7825188 chr8:9088881 G>A
- Sequence
cagaacaggccaaacacattccct[G/A]accaggtcatgcgggtgagttaat
- ASB in cell types
- CD14+ monocytes HCASMC (Human coronary artery smooth muscle cells) CTV-1 (Adult T acute lymphoblastic leukemia) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- STAT1_HUMAN TCF21_HUMAN TF65_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.79 | n/a | 2.00 | n/a | No Hit | |||
| TCF21_HUMAN | 2.05 | n/a | 2.00 | n/a | No Hit | |||
| TF65_HUMAN | 1.35 | 0.66 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, diastolic blood pressure (dbp), eye color, parkinsons disease, systolic blood pressure (sbp), total cholesterol
GTEx eQTL Adipose_Visceral_Omentum, Brain_Spinal_cord_cervical_c-1, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood